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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs55664827 chr6:26824920 T/C ZFP57 chr6:29640169-29648887:- 0.75 7.51 2.91E-13 Box Plot
THCA rs55683451 chr8:11237587 CAAAA/C SGK223 chr8:8175258-8244008:- 0.46 8.87 1.42E-17 Box Plot
THCA rs55690788 chr6:28436145 T/C BTN3A2 chr6:26365387-26378548:+ -0.77 -10.84 1.24E-24 Box Plot
THCA rs55690788 chr6:28436145 T/C RNF5P1 chr8:38458179-38458718:- 0.67 5.92 6.2E-9 Box Plot
THCA rs55690788 chr6:28436145 T/C ZFP57 chr6:29640169-29648887:- 0.92 8.83 1.96E-17 Box Plot
THCA rs55691432 chr1:111155573 G/C DLD chr7:107531415-107572175:+ -0.28 -6.42 3.2E-10 Box Plot
THCA rs55700694 chr14:39749249 GGT/G LOC647288 chr13:75811890-75814517:- 0.61 13.05 1.64E-33 Box Plot
THCA rs557042 chr6:27845129 C/T BTN3A2 chr6:26365387-26378548:+ -0.55 -9.52 8.93E-20 Box Plot
THCA rs557042 chr6:27845129 C/T RNF5P1 chr8:38458179-38458718:- 0.54 6 3.94E-9 Box Plot
THCA rs557042 chr6:27845129 C/T ZFP57 chr6:29640169-29648887:- 0.61 7.21 2.21E-12 Box Plot
THCA rs55706012 chr6:26266311 A/C ZFP57 chr6:29640169-29648887:- 0.69 6.06 2.76E-9 Box Plot
THCA rs55714045 chr7:140170136 G/A LOC441455 chr9:99488103-99489749:+ 0.48 6.39 3.92E-10 Box Plot
THCA rs55726938 chr10:88918386 C/T FAM35B chr10:46897641-46939143:+ 0.37 7.23 1.87E-12 Box Plot
THCA rs55727518 chr3:125780918 C/T ROPN1 chr3:123687368-123711025:- 0.34 6.13 1.84E-9 Box Plot
THCA rs55738168 chr14:89703643 C/A NCKAP5L chr12:50184929-50222533:- -0.25 -5.92 6.07E-9 Box Plot